assemblyinfo

Assemblyinfo is a library to interact with genome metadata from different providers in python. This package is build on top of NCBI and UCSC data, allowing fast and accurate interconversions between chromosome names, latest assemblies and more!

Contents:

• Quickstart
  • Installation

Tutorials

• Get quick insights about the species you’re working on!
• Retrieve chromosome data using GenomeInfo!
• Change between chromosome naming nomenclatures easily!

API

• Assembly Accessions
• Assembly Information
• Assembly Chromosomes
• Assembly General Information
• Building Strategy

Indices and tables

• Index

• Module Index

• Search Page